Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825437.1_cds_XP_016502341.1_15994
CDS Infomation

[gene=LOC107820553] [db_xref=GeneID:107820553] [protein=uncharacterized protein LOC107820553] [protein_id=XP_016502341.1] [location=complement(join(25363..25680,28523..28610,28693..28799,28897..28958,29270..29327,29413..30276,33079..33427,33514..33614,34640..34777))] [gbkey=CDS]
Sequence

ATGGGTAGTGGAGATGGAGAAGATGATCGGACGTTTAGGGTTAATAATTTCACTGCCGAA
GGATTCTCGAAGCTTCGGGAACGAGTTAAGGATAAACTCAAGGAGTTCATGGGTGACTAC
ACTGATGATACTCTCGTGGAATATGTTATAGTCTTGTTAAAAAATGGAAGGCAGAAAGAA
GAAGCAAGAAATGAATTGAATGTTTTTCTTGGAGAAGACAGTGACTCATTTGTTGCTTGG
CTGTGGGATCACCTGGGATCAAATATAGGTCTTTATGTGCAGCAAAAGGATCCTGATACA
GGAGGAGGAACAAAAAACGAACTTACTAGCGCAGAGCCGGCTGCAAAGAATGATTTGCAC
CACCTGGACTCTGATGCTGATAAAGTGAAATCAAACAAATCTAGAAGCCGCCGAAGGGAG
TGGAAAGGACTGGTTGCTATTGAACACCCTACTCTACATAGTTCTTTAGCAGACAGCACT
TCTATGGAGGAGGAAGCTCATCAAAAAGTTGGTCATTCAAAGCGATCCCTCTCCCCCCAG
CCAGAACTTCAGAGAAAAAGAGACCGACCTGAAGAAAGGCCGAAAAAGAGGGAAGGCATT
CGTCAACCAGCAATTGCTGCTACTCGAAGGCTGCTGCAATTTGCAGTAAGAGATGCCGTG
GCTACTTCTAGGCCATCCAATTCCAATCTAGAATCCTCACCTTCACTAAAGCGTCTTCGC
TCTGTGGTCTCTACATCTGTGGAGGACTCATCTCTTCAAGAACGCCCACAGAGGATACGA
TCGGTTGCAAGAGCACCAAATGCCATGGCCACCGCTATAAGAGCCGTTGCAGAAGCTGCA
AAAGATGTGGCGAAAGTTAGATCGTCGGCTAATGTGTTTGACAGGCTGGGTCGTGCTACT
GGCGCTCTCGATCCTTCAAGCAGATTGGAAGAATCTGATCAAGCTGTTGCCAAAGATGTA
CAAGATCAATCTTTTGCTGATGCCTCAACTTACCTTCACAGAAGTAATTATAGAGGAAAG
CATATTGGGAAGTCTACGTTGAACGATGATACTGCAGTGCTTTATGATTCAGCATTGGAT
GAAGAAGCTGATCATGGTATCAGCATTGTGAATAAAGGGGCTATAGATGCCTCGAGAACT
GGTGCACGTTTTAAAAACATAGGCGAGACTCCACTTGTAGTCGAGTATGGTGTTACTGAC
AATGCCAATGATATTTTGCACAAGTCACAGAAGGACCAAGATCGACCAATATTTGCTCCT
GGTGCTCCTCACCAGCCAATGAATGTTACATTAAATGTGAATACCTGGAAATCACCTCAG
TATCAGGAGGCAAGACAAGCATTGGAGATAGAGAATCAGAGATCTACACAGAGCAGCGAA
GGCTTGGCCAGCGAACCTGACATGCTGTTGACAAAAGAAAGCACTAATCCTATTGCAGTT
ACTAATGGAAATGTGAAACCATATGCGGACACACAGAAGGAATCTCAAAAGATGGCTTCT
ATTAATCAGGGTTTGTATTCTACTGGTCCACCTACAGAAGATGCTGATTCACGGACCATC
TTTGTCAACAATGTTCATTTTGCTGCTACAAAGGATAGTCTTTCTCGGCACTTCAATAAA
TTTGGGGAAGTGCTTAAAGTGATCATCCTGACTGATGCAGCAACTGGGCAACCCAAAGGG
TCAGCTTACGTAGAGTTCATGAGAAAAGAATCCGCAGAGAATGCTTTATCTCTTGATGGA
ACATCGTTCATGTCCCGCATTCTGAAGGTTGTGAGGAAAAGCTCTGCTACTCCTGAAGCA
GCATCTGTCACTGTATGGCCTCGTGTTACAAGGGCTGGTCCTTTTGCAGTTTCTAGATTT
GGCCGGGTTCCTTTTCCTAGAGGCATTCCCACTTTGTACAGGTCCCGGCTCCCAGTCAGG
CCTGGTGCTAGAAGTATGCAATGGAAGCGTGATGCTCAGCCCACATCGGCTGAGAATTCT
GGTTTGTTAACACCCTCAAGTAATGCAGTTCCTTCTCCTATTCCTCGGAGTATGACATAT
GTACGAGCAGAATCTAAGATTAATGGAGATTCTAGTACGGCTTAG

Peptide Sequence

PEP ID

XP_016502341.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107820553 [Nicotiana tabacum]
Sequence

MGSGDGEDDRTFRVNNFTAEGFSKLRERVKDKLKEFMGDYTDDTLVEYVIVLLKNGRQKE
EARNELNVFLGEDSDSFVAWLWDHLGSNIGLYVQQKDPDTGGGTKNELTSAEPAAKNDLH
HLDSDADKVKSNKSRSRRREWKGLVAIEHPTLHSSLADSTSMEEEAHQKVGHSKRSLSPQ
PELQRKRDRPEERPKKREGIRQPAIAATRRLLQFAVRDAVATSRPSNSNLESSPSLKRLR
SVVSTSVEDSSLQERPQRIRSVARAPNAMATAIRAVAEAAKDVAKVRSSANVFDRLGRAT
GALDPSSRLEESDQAVAKDVQDQSFADASTYLHRSNYRGKHIGKSTLNDDTAVLYDSALD
EEADHGISIVNKGAIDASRTGARFKNIGETPLVVEYGVTDNANDILHKSQKDQDRPIFAP
GAPHQPMNVTLNVNTWKSPQYQEARQALEIENQRSTQSSEGLASEPDMLLTKESTNPIAV
TNGNVKPYADTQKESQKMASINQGLYSTGPPTEDADSRTIFVNNVHFAATKDSLSRHFNK
FGEVLKVIILTDAATGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKSSATPEA
ASVTVWPRVTRAGPFAVSRFGRVPFPRGIPTLYRSRLPVRPGARSMQWKRDAQPTSAENS
GLLTPSSNAVPSPIPRSMTYVRAESKINGDSSTA

Transcript Sequence

Gene sequence data has not been registered.